![Gap open cost, Gap extension cost and End gap cost. The precision of these parameters is to one place of decimal. Gap open cost, Gap extension cost and End gap cost. The precision of these parameters is to one place of decimal.](https://resources.qiagenbioinformatics.com/manuals/clcgenomicsworkbench/650/align2.png)
Gap open cost, Gap extension cost and End gap cost. The precision of these parameters is to one place of decimal.
![Figure 1 from Introducing Variable Gap Penalties into Three-Sequence Alignment for Protein Sequences | Semantic Scholar Figure 1 from Introducing Variable Gap Penalties into Three-Sequence Alignment for Protein Sequences | Semantic Scholar](https://d3i71xaburhd42.cloudfront.net/747d549e525758d6724ffa47f559c70146d23204/2-Figure1-1.png)
Figure 1 from Introducing Variable Gap Penalties into Three-Sequence Alignment for Protein Sequences | Semantic Scholar
![Gap open cost, Gap extension cost and End gap cost. The precision of these parameters is to one place of decimal. Gap open cost, Gap extension cost and End gap cost. The precision of these parameters is to one place of decimal.](https://resources.qiagenbioinformatics.com/manuals/clcgenomicsworkbench/650/align3.png)
Gap open cost, Gap extension cost and End gap cost. The precision of these parameters is to one place of decimal.
![MUSCLE: a multiple sequence alignment method with reduced time and space complexity. - Abstract - Europe PMC MUSCLE: a multiple sequence alignment method with reduced time and space complexity. - Abstract - Europe PMC](https://europepmc.org/articles/PMC517706/bin/1471-2105-5-113-11.jpg)
MUSCLE: a multiple sequence alignment method with reduced time and space complexity. - Abstract - Europe PMC
![MUSCLE: a multiple sequence alignment method with reduced time and space complexity | BMC Bioinformatics | Full Text MUSCLE: a multiple sequence alignment method with reduced time and space complexity | BMC Bioinformatics | Full Text](https://media.springernature.com/m685/springer-static/image/art%3A10.1186%2F1471-2105-5-113/MediaObjects/12859_2004_Article_229_Fig3_HTML.jpg)
MUSCLE: a multiple sequence alignment method with reduced time and space complexity | BMC Bioinformatics | Full Text
![MUSCLE: a multiple sequence alignment method with reduced time and space complexity | BMC Bioinformatics | Full Text MUSCLE: a multiple sequence alignment method with reduced time and space complexity | BMC Bioinformatics | Full Text](https://media.springernature.com/full/springer-static/image/art%3A10.1186%2F1471-2105-5-113/MediaObjects/12859_2004_Article_229_Fig4_HTML.jpg)