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ATAC_Analysis_Demo
ATAC_Analysis_Demo

Multiomics analyses reveal DARS1-AS1/YBX1–controlled posttranscriptional  circuits promoting glioblastoma tumorigenesis/radioresistance | Science  Advances
Multiomics analyses reveal DARS1-AS1/YBX1–controlled posttranscriptional circuits promoting glioblastoma tumorigenesis/radioresistance | Science Advances

Mapping Mammalian Cell-type-specific Transcriptional Regulatory Networks  Using KD-CAGE and ChIP-seq Data in the TC-YIK Cell Line
Mapping Mammalian Cell-type-specific Transcriptional Regulatory Networks Using KD-CAGE and ChIP-seq Data in the TC-YIK Cell Line

csRNA-seq captured changes in the transcriptome with high fidelity. (A)...  | Download Scientific Diagram
csRNA-seq captured changes in the transcriptome with high fidelity. (A)... | Download Scientific Diagram

Alternative promoters in CpG depleted regions pervasively account for  epigenetic misregulation of cancer transcriptomes | bioRxiv
Alternative promoters in CpG depleted regions pervasively account for epigenetic misregulation of cancer transcriptomes | bioRxiv

IJMS | Free Full-Text | Multi-Level Control of the ATM/ATR-CHK1 Axis by the  Transcription Factor E4F1 in Triple-Negative Breast Cancer
IJMS | Free Full-Text | Multi-Level Control of the ATM/ATR-CHK1 Axis by the Transcription Factor E4F1 in Triple-Negative Breast Cancer

Homer Software and Data Download
Homer Software and Data Download

Connectome and regulatory hubs of CAGE highly active enhancers | Scientific  Reports
Connectome and regulatory hubs of CAGE highly active enhancers | Scientific Reports

Balanced control of thermogenesis by nuclear receptor corepressors in brown  adipose tissue | PNAS
Balanced control of thermogenesis by nuclear receptor corepressors in brown adipose tissue | PNAS

Dynamic control of chromatin-associated m6A methylation regulates nascent  RNA synthesis - ScienceDirect
Dynamic control of chromatin-associated m6A methylation regulates nascent RNA synthesis - ScienceDirect

Endogenous retroviruses co-opted into divergently transcribed regulatory  elements shape the regulatory landscape of embryonic stem cells | bioRxiv
Endogenous retroviruses co-opted into divergently transcribed regulatory elements shape the regulatory landscape of embryonic stem cells | bioRxiv

Alternative promoters in CpG depleted regions pervasively account for  epigenetic misregulation of cancer transcriptomes | bioRxiv
Alternative promoters in CpG depleted regions pervasively account for epigenetic misregulation of cancer transcriptomes | bioRxiv

Frontiers | Mapping Mammalian Cell-type-specific Transcriptional Regulatory  Networks Using KD-CAGE and ChIP-seq Data in the TC-YIK Cell Line
Frontiers | Mapping Mammalian Cell-type-specific Transcriptional Regulatory Networks Using KD-CAGE and ChIP-seq Data in the TC-YIK Cell Line

An engineered Sox17 induces somatic to neural stem cell fate transitions  independently from pluripotency reprogramming | Science Advances
An engineered Sox17 induces somatic to neural stem cell fate transitions independently from pluripotency reprogramming | Science Advances

Sequence-level instructions direct transcription at polyT short tandem  repeats | bioRxiv
Sequence-level instructions direct transcription at polyT short tandem repeats | bioRxiv

Single-cell chromatin accessibility and transcriptome atlas of mouse  embryos - ScienceDirect
Single-cell chromatin accessibility and transcriptome atlas of mouse embryos - ScienceDirect

Mapping Mammalian Cell-type-specific Transcriptional Regulatory Networks  Using KD-CAGE and ChIP-seq Data in the TC-YIK Cell Line
Mapping Mammalian Cell-type-specific Transcriptional Regulatory Networks Using KD-CAGE and ChIP-seq Data in the TC-YIK Cell Line

Homer Software and Data Download
Homer Software and Data Download

Alternative promoters in CpG depleted regions are prevalently associated  with epigenetic misregulation of liver cancer transcriptomes | Nature  Communications
Alternative promoters in CpG depleted regions are prevalently associated with epigenetic misregulation of liver cancer transcriptomes | Nature Communications

Alternative promoters in CpG depleted regions pervasively account for  epigenetic misregulation of cancer transcriptomes
Alternative promoters in CpG depleted regions pervasively account for epigenetic misregulation of cancer transcriptomes

Lactobacillus plantarum-derived indole-3-lactic acid ameliorates colorectal  tumorigenesis via epigenetic regulation of CD8+ T cell immunity -  ScienceDirect
Lactobacillus plantarum-derived indole-3-lactic acid ameliorates colorectal tumorigenesis via epigenetic regulation of CD8+ T cell immunity - ScienceDirect

Smarcd3 is an epigenetic modulator of the metabolic landscape in pancreatic  ductal adenocarcinoma | Nature Communications
Smarcd3 is an epigenetic modulator of the metabolic landscape in pancreatic ductal adenocarcinoma | Nature Communications

Sequence-level instructions direct transcription at polyT short tandem  repeats | bioRxiv
Sequence-level instructions direct transcription at polyT short tandem repeats | bioRxiv

csRNA-seq accurately profiles TSSs across eukaryotes. Capturing stable... |  Download Scientific Diagram
csRNA-seq accurately profiles TSSs across eukaryotes. Capturing stable... | Download Scientific Diagram

Mapping Mammalian Cell-type-specific Transcriptional Regulatory Networks  Using KD-CAGE and ChIP-seq Data in the TC-YIK Cell Line
Mapping Mammalian Cell-type-specific Transcriptional Regulatory Networks Using KD-CAGE and ChIP-seq Data in the TC-YIK Cell Line